Microbial Diversity as a Lever for Effective Biodiversity Conservation: Linking Hosts, Environments, and Health (Symposium)
Tracks
Programme
| Thursday, July 9, 2026 |
| 4:00 PM - 5:30 PM |
| Room DM.1.15 |
Details
Recent advances in high-throughput DNA and RNA sequencing have revolutionized our ability to characterize the taxonomic composition, diversity, and functional potential of complex host-associated microbial communities—including microeukaryotes, prokaryotes, and viruses. Among these, the prokaryotic component of the gut microbiota remains the most extensively studied. Established early in life, it plays fundamental roles in food assimilation, metabolism, immune system development, and pathogen defense, thereby shaping host health and survival (Koskella & Bergelson, 2020). Beyond physiological functions, animal microbiota may also enhance host adaptability to varying environments, diets, and pathogen pressures, and therefore, their conservation status (Hauffe & Barelli, 2018; Trevelline et al., 2019).
The composition and diversity of host-associated microbiota is influenced by a complex interplay of intrinsic (genetics, age, sex) and extrinsic (diet, lifestyle and environmental exposure) factors (Flores et al., 2025). However, the diversity and ecological roles of host-associated fungi and other microeukaryotes remain comparatively underexplored, underscoring the need for more integrative studies on their contributions to animal health and adaptive potential.
Moreover, within the framework of the One Health approach, recent research has revealed that environmental reservoirs such as soil and water, among the most microbially diverse ecosystems on Earth (Labouyrie et al., 2023), can act as sources of both beneficial and pathogenic microorganisms influencing animal microbiota across taxa (Banerjee & van der Heijden, 2023; Zanovello et al., 2025).
This symposium aims to explore how our understanding of host-associated microbial diversity and function, under both controlled and natural conditions, is advancing, and how these results are essential for elucidating the intricate links between microbiomes and long-term animal conservation. We will encourage submission showing how multidisciplinary approaches integrating microbiology, ecology, and environmental sciences are critical to assessing the impacts of anthropogenic activities, habitat alteration, pollution, and climate change on host–microbe interactions and the resilience of animal populations.
Speakers and Presentation Titles
Mr. Aloïs Berard
INRAE
Forest environment influence on microbiome composition, diet, and their interactions in a generalist rodent
Dr. Giulio Galla
Research and Innovation Centre, Fondazione Edmund Mach
Microbial Diversity as a Lever for Ecosystem Conservation: Metagenomic Insights from a Rewilded Urban Floodplain
Dr. Toni Jernfors
Postdoctoral Researcher
University Of Jyväskylä
Soil microbes drive gut fungal assembly and immunity in a wild rodent model
Ms. Elif Kaplan
PhD Student
Charles University
Impact of lifestyle transitions on bacteriophage–bacterium interactions in the gut microbiome
Mr. Jakub Kreisinger
Department of Zoology, Faculty of Science,Charles University
Drivers of gut microbiota variation in endemic and invasive rodents of Papua New Guinea
Ms. Michaela Majerová
Charles University, Prague
More than just friendship? Social behavior as a mechanism for microbiota adaptation in Przewalski’s horse
Dr. Jan Zukal
Senior Researcher
Institute of Vertebrate Biology CAS
Non-tuberculous mycobacteria and bats: diversity and zoonotic potential
Dr. Katerina Zukalova
Postdoc
Institute of Vertebrate Biology CAS
Microbial architects of scent: VOCs and bacteriomes in bat glands for olfactory signalling and defence
Organiser
Giulio Galla
Research and Innovation Centre, Fondazione Edmund Mach
Heidi Christine Hauffe
Head - Conservation Genomics Research Unit
Fondazione E. Mach